CDS

Accession Number TCMCG051C37065
gbkey CDS
Protein Id XP_024439251.1
Location complement(join(3368650..3368982,3369971..3370168,3370901..3371004,3371111..3372527,3373110..3373478,3374113..3374274,3374622..3374846,3375015..3375542,3375685..3375762,3376122..3376196,3376337..3376642))
Gene LOC18104088
GeneID 18104088
Organism Populus trichocarpa

Protein

Length 1264aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024583483.1
Definition putative lysine-specific demethylase JMJ16 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category K
Description lysine-specific demethylase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11446        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000976        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005506        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006479        [VIEW IN EMBL-EBI]
GO:0006482        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008198        [VIEW IN EMBL-EBI]
GO:0008213        [VIEW IN EMBL-EBI]
GO:0008214        [VIEW IN EMBL-EBI]
GO:0008276        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009648        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009909        [VIEW IN EMBL-EBI]
GO:0009910        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010216        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016571        [VIEW IN EMBL-EBI]
GO:0016577        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032451        [VIEW IN EMBL-EBI]
GO:0032452        [VIEW IN EMBL-EBI]
GO:0032453        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034720        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0040009        [VIEW IN EMBL-EBI]
GO:0040010        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042054        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045814        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045927        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048573        [VIEW IN EMBL-EBI]
GO:0048579        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048581        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048586        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051241        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070076        [VIEW IN EMBL-EBI]
GO:0070988        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000028        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000242        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAACTGAACTCATTAGAGTTCATGTTAAGGAGGAGAATGATGATATCCCATCAGTTCCACCTGGTTTCGAGTCTTTTGCAGCTTACACCTTAAAAAGGGTGCCAGATGGTGAAAAACAAGAAAGTAATGTAACCAGTTGTTCAGCCACTACAAGCGCTTCTGAATCACAGTCAGTCAAGATGGACACAGAGTTTGAGGATGAAGCAAAAGTTACGAGGTCCCTTCGACGCAGACCCTGGATAAAGTTTGAACATTTGGATAGCTGTTCAGAGGACGAGTCTGATTCTGTGAAGCTTAATCAACAGAATCTCTCCTTAAGGTCTCGCCTTCCCAAGGGAGTGATCCGTGGATGTCCACAATGCAGTAATTGCCAAAAGGTCAGTGCAAGATGGCATCCAGAAAGTGCTTGTAAGCTTGATATTGAGGATGCTCCTGTATTCTACCCAACTGAAGAGGAGTTTGAAGATACTTTGAAATATATTGCTAGCATACGGCCTAAAGCTGAACAATATGGAATCTGTCGCATTGTTCCTCCTCCTTCTTGGAAACCTCCCTGTCCCCTTAAAGAAAAAACTATCTGGGAGGGCTCTACGTTTGCAACTCGTGTCCAGAGGGTTGACAAACTGCAGAACCGGGACTCTATGAGAAAGAGGTCAACGATGTCTAATCATACAAGGAAGAAAAGGAGAAGATGCATGAGCATGGCAGTAGATTGTGGTACAGATATTGGAAGCATCTCAGGGTCAAATGATGCTGGTGTTTGTGAAGCTGAGAGATTTGGGTTTGAACCTGGCCCACTGTTTACTTTGGATACATTTCAGAAATATGCTGATGATTTCAAGGCCCAGTACTTCAGGAAGAATGAGAATACTATTAATAAGGGAGGCGATATGACAACGTTTCAGAAGACTTGTGAACCAACATTGGATAATATTGAGGGCGAATATTGGCGAATTGTAGAGAAAGCAACTGAAGAAATTGAGGTCCTTTATGGGGCTGATCTGGAAACTGGGGTTTTTGGCAGTGGGTTTCCAAAAACATCTAATGAAGTTAGTTCTGCAACAAATGATCGTTATACAAAATCAGGCTGGAACCTGAATAACTTTCCGAGGCTTCCTGGATCCATTCTTTCCTTTGAAAGTGGGGATATATCCGGTGTTTTGGTGCCATGGCTGTATATAGGGATGTGCTTCTCCTCCTTCTGTTGGCATGTTGAAGATCATCACCTATATTCACTGAATTACATGCATTGGGGCGCACAAAAGATGTGGTATGGTGTGCCAGGGAAGGATGCCATTAAATTGGAAGAGACCATGAGAAAGCATTTACCTGATCTTTTTGAAGAACAACCCGACTTGCTTCATAAGCTGGTGACCCAGCTTTCCCCCAACATACTAAGATCTGAAGGAGTGCCTGTCTATCGGTGTGTTCAGAATTCCGGAGAGTTTGTGCTAACCTTTCCTCGAGCATATCATTCGGGGTTTAATTGTGGTTTCAATTGTGCGGAGGCAGTGAATGTAGCTCCTGTTGACTGGTTGCCCCATGGACAGACTGCTATAGAGCTGTACTGTGAGCAGAGACGGAGGACTTCCATCTCCCATGATAAACTGTTGCTTGGGGCAGCAAGGGAAGCAGTGAGAGCACATTGGGAACTTAATTTACTTAAGAGGAATACCTTGGATAACTTAAGATGGAAAGACGTGTGTGGAAAAAATGGGATATTAGCAAAAGCATTCAAGGAACGTGTGGAGACAGAGCGTGTGAGGAGACAATTTCTCTGCAACTCTTCCCCAACATTGAAGATGGAGAGTGATTTTGATGCCACAAGTGAGAGGGAATGCAGTGTCTGCCTTTTTGATTTGCATCTGTCTGCAGCAGGGTGTCATTGCTCTCCAGATAAGTTTGCATGCTTGACTCATGCAAAGCAGTTGTGTTCATGTGCTTGGGGTGCCAAATTTTTCCTGTTTCGCTATGATATCAGTGAATTAAATATCCTCCTGGAGGCATTGGAAGGAAAATTGAGTGCAGTATACCGATGGGCAAGACTAGATCTTGGACTTGCCCTGACGAGTTTCGTTTCCAAAGACAACACGCAAGATGTTAAATTATCTTATTCTCCAATAAGAACAGCAACTGAACCGGTGAGATCACACACACCAGCAGATCCTTGTAGAGATTTACCAGGGAGAGCAATATCTAGTGATATTAGAATGAATTCATCTGGGATCTGTAGTCAGATAGCATTGGAAGAAGAGAAGAAACCACCTGAAGGCACTCCTTCAAAAGATGTGAGGGCATCATCTGTATCTCATAGTTCTTTTCAAGTAATTGAGAGGGACAATGACAATTTGAAGCTAAACCAAAAAGGTTCTAGTCTTTTGTCTACCAATTTAAGAACGCTAGTTTGCCTGTTGTCTCAAGAAGACACATCTTATGCTGCAGGCCTGGCTTCAGAGAAATGTGAAGGGAAGAAGCCTTCAACTTTGGGTAATGACAATGTTATTCTTCTTAGTGATGATGAAGGTGATGAACAGAAGCCAATTTTAGAAAGGGCAAAAGAAAATGTTTACGGGAAGCTATCAATTTTGCATTATAGTTCATGTAATGACAATAAAGATTCAATCTTAACTGTTCCTGTGGTTGATGGAGCAGTTAAGAGTGAAAAGAATGTCAATTCGTTACCTGATGAACAAAAAAATAATTCTTCATCTGGTCCTGTGGTGCAAGTGAAGGATGGCTATCATCAAGATGGTGGAAAGGTTTTGGAATTTAATCAACAGAATGTTTCTTGCCACACAGGTCCTAGCACAGCAGGATTTGGTAGGAATGTTCAGAATTCCTCAACTAATAGAGATACCAGTAAGGATAACGGAATGACAGATGTTGGGAGTCAGCATCCACAGCCATGTGGCATTGGAAAGCTTAACAATGCAGACAAGATGGGAGGAAATGCCACCTCAACTTCATTGGACAACTCAAGAATTATGGCAGGTAGCCCATCTTCCTCGCAAAATAACTTGGAGAGACACTACCGCCAGAAGGGTCCCCGCATTGCCAAGGTAGTGCGAAGGATCAATTGCAATGTTGAACCTCTGGAATTTGGGGTTGTGCTTTCTGGAAAGTCATGGTGCAACAGCCAAGCAATTTTTCCCAAAGGATTTAGAAGTCGAGTTAGGTACATAAGTGTTCTAGATCCAGCAAATATGTGTTACTATGTCTCTGAAATACTGGATGCAGGGCGAAACGGTCCTCTATTTATGGTTTCCTTGGAGCATTGCCCAAATGAGGTATTTTTTCATGTTTCAGCAGCCAGATGCTGGGAAATGGTTAGAGAGAGAGTGAATCAGGAGATCACAAAGCAGCATAAATCTGGAAGAATGAATCTTCCTCCCTTACAACCTCCTGGAAGTCTTGATGGCTTTGAAATGTTTGGGTTTTCTTCACCAGCAATTGTGCAGGCCATAGAAGCATTAGACAGGAATCGAGTTTGTACAGATTATTGGGACTCCAGGCCATATTCACGGCCACAAGGACAGATTCCGCAACATTCTCAATCCATAGTCAATGCAGGGCATTCCCAGGGAACACATGAGGACCAGAATATTAGTAAAGCCCCCGGGAGCCAGTTATTACCAGTTGAAGCTGATACGATACTTAGAGGTCTATTCAAGAAGGCAAGCCCAGAAGAATTGATCGCACTGAGTCATATTTTAAGTGGCAATAAGCCAACAGCTAATCCTGGTCTAATAGCACAGCTTCTTAATGAAGAGATTTGCCACCGTCCTAGATGA
Protein:  
MGTELIRVHVKEENDDIPSVPPGFESFAAYTLKRVPDGEKQESNVTSCSATTSASESQSVKMDTEFEDEAKVTRSLRRRPWIKFEHLDSCSEDESDSVKLNQQNLSLRSRLPKGVIRGCPQCSNCQKVSARWHPESACKLDIEDAPVFYPTEEEFEDTLKYIASIRPKAEQYGICRIVPPPSWKPPCPLKEKTIWEGSTFATRVQRVDKLQNRDSMRKRSTMSNHTRKKRRRCMSMAVDCGTDIGSISGSNDAGVCEAERFGFEPGPLFTLDTFQKYADDFKAQYFRKNENTINKGGDMTTFQKTCEPTLDNIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKTSNEVSSATNDRYTKSGWNLNNFPRLPGSILSFESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAQKMWYGVPGKDAIKLEETMRKHLPDLFEEQPDLLHKLVTQLSPNILRSEGVPVYRCVQNSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQTAIELYCEQRRRTSISHDKLLLGAAREAVRAHWELNLLKRNTLDNLRWKDVCGKNGILAKAFKERVETERVRRQFLCNSSPTLKMESDFDATSERECSVCLFDLHLSAAGCHCSPDKFACLTHAKQLCSCAWGAKFFLFRYDISELNILLEALEGKLSAVYRWARLDLGLALTSFVSKDNTQDVKLSYSPIRTATEPVRSHTPADPCRDLPGRAISSDIRMNSSGICSQIALEEEKKPPEGTPSKDVRASSVSHSSFQVIERDNDNLKLNQKGSSLLSTNLRTLVCLLSQEDTSYAAGLASEKCEGKKPSTLGNDNVILLSDDEGDEQKPILERAKENVYGKLSILHYSSCNDNKDSILTVPVVDGAVKSEKNVNSLPDEQKNNSSSGPVVQVKDGYHQDGGKVLEFNQQNVSCHTGPSTAGFGRNVQNSSTNRDTSKDNGMTDVGSQHPQPCGIGKLNNADKMGGNATSTSLDNSRIMAGSPSSSQNNLERHYRQKGPRIAKVVRRINCNVEPLEFGVVLSGKSWCNSQAIFPKGFRSRVRYISVLDPANMCYYVSEILDAGRNGPLFMVSLEHCPNEVFFHVSAARCWEMVRERVNQEITKQHKSGRMNLPPLQPPGSLDGFEMFGFSSPAIVQAIEALDRNRVCTDYWDSRPYSRPQGQIPQHSQSIVNAGHSQGTHEDQNISKAPGSQLLPVEADTILRGLFKKASPEELIALSHILSGNKPTANPGLIAQLLNEEICHRPR